Job Description P0ADX9 Confidence 99.64% Date Thu Jan 5 11:22:04 GMT 2012 Rank 53 Aligned Residues 142 % Identity 15% Template c3axtA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable n(2),n(2)-dimethylguanosine trna methyltransferase PDBTitle: complex structure of trna methyltransferase trm1 from aquifex aeolicus2 with s-adenosyl-l-methionine Resolution 2.49 Å

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		12	.	.	.	.		.	.	.	20	.	.	.							.	.	.	.	.	.	30	.	.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.
Predicted Secondary structure							.								.	.	.	.	.	.														.	.	.	.																																					.	.
Query SS confidence							.								.	.	.	.	.	.														.	.	.	.																																					.	.
Query Sequence		I	R	I	I	G	.	G	Q	W	R	G	R	K	.	.	.	.	.	.	L	P	V	P	D	S	P	G	L	R	P	T	T	.	.	.	.	D	R	V	R	E	T	L	F	N	W	L	A	P	V	I	V	D	A	Q	C	L	D	C	F	A	G	S	G	A	L	G	L	E	A	L	S	.	.	R	Y	A	A	G	A
Query Conservation							.								.	.	.	.	.	.														.	.	.	.																																					.	.
Alig confidence							.								.	.	.	.	.	.														.	.	.	.																																					.	.
Template Conservation
Template Sequence		M	E	I	V	Q	E	G	I	A	K	I	I	V	P	E	I	P	K	T	V	S	S	D	M	P	V	F	Y	N	P	R	M	R	V	N	R	D	L	A	V	L	G	L	E	Y	L	C	K	K	L	G	R	P	V	K	V	A	D	P	L	S	A	S	G	I	R	A	I	R	F	L	L	E	T	S	C	V	E	K	A
Template Known Secondary structure								T	T										S	S			T	T			S	S			G	G	G																				S							S	S		T	T	T											S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																										.	.															.
Query SS confidence																										.	.															.
Query Sequence		T	L	I	E	M	D	R	A	V	S	Q	Q	L	I	K	N	L	A	T	L	K	A	G	N	.	.	A	R	V	V	N	S	N	A	M	S	F	L	A	Q	.	K	G	T	P	H	N	I	V	F	V	D	P	P	F	R	R	G	L	L	E	E	T	I	N	L	L	E	D	N	G	W	L	A	D	E	A	L	I	Y
Query Conservation																										.	.															.
Alig confidence																										.	.															.													.	.	.															.	.
Template Conservation																																																							.	.	.															.	.
Template Sequence		Y	A	N	D	I	S	S	K	A	I	E	I	M	K	E	N	F	K	L	N	N	I	P	E	D	R	Y	E	I	H	G	M	E	A	N	F	F	L	R	K	E	W	G	F	G	F	D	Y	V	D	L	D	P	.	.	.	F	G	T	P	V	P	F	I	E	S	V	A	L	S	.	.	M	K	R	G	G	I	L	S
Template Known Secondary structure						S															T	T			G	G	G						S							T	S			S	S										.	.	.	S	S													.	.
Template Predicted Secondary structure																																																							.	.	.															.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.
		156	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		156	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions