Job Description P0ADX9 Confidence 98.72% Date Thu Jan 5 11:22:04 GMT 2012 Rank 266 Aligned Residues 100 % Identity 16% Template c3adnB_ PDB info PDB header:transferase Chain: B: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of spermidine synthase from e. coli. Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		V	D	A	Q	C	L	D	C	F	A	G	S	G	A	L	G	L	E	A	L	S	R	.	Y	A	A	G	A	T	L	I	E	M	D	R	A	V	S	Q	Q	L	I	K	N	L	A	T	L	K	A	G	N	A	R	V	V	N	S	N	A	M	S	F	L	A	Q	K	G	T	P	H	N	I	V	F	V	D	P	P	F
Query Conservation																								.
Alig confidence																								.																																								.
Template Conservation																																																																.
Template Sequence		H	A	K	H	V	L	I	I	G	G	G	D	G	A	M	L	R	E	V	T	R	H	K	N	V	E	S	I	T	M	V	E	I	D	A	G	V	V	S	F	C	R	Q	Y	L	P	N	H	N	A	G	S	Y	D	D	P	R	F	K	L	V	I	.	V	N	Q	T	S	Q	T	F	D	V	I	I	S	D	C	T	S
Template Known Secondary structure										S			S	S							T	T		T	T									S												S					T	T		T	T		T	T						.				T	T												T
Template Predicted Secondary structure																																																																.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	G	L	L	E	E	T	I	N	L	L	E	D	N	G	W	L	A	D	E	A	L	I	Y	V	E	S	E	V
Query Conservation
Alig confidence			.	.	.	.	.	.							.	.
Template Conservation			.	.	.	.	.	.							.	.
Template Sequence		A	.	.	.	.	.	.	F	Y	E	G	C	K	.	.	R	C	L	N	P	G	G	I	F	V	A	Q	N	G	V
Template Known Secondary structure		T	.	.	.	.	.	.							.	.		T
Template Predicted Secondary structure			.	.	.	.	.	.							.	.
Template SS confidence
		173							.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions