Job Description P0ADX9 Confidence 99.76% Date Thu Jan 5 11:22:04 GMT 2012 Rank 26 Aligned Residues 149 % Identity 17% Template c2vs1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:uncharacterized rna methyltransferase pyrab10780; PDBTitle: the crystal structure of pyrococcus abyssi trna (uracil-54,2 c5)-methyltransferase in complex with s-adenosyl-l-3 homocysteine Resolution 2.1 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.							.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.
Query Sequence		K	K	P	N	H	S	G	S	G	Q	I	R	I	I	G	G	.	.	.	.	.	.	Q	W	R	G	R	K	L	P	V	P	D	S	P	G	L	R	P	T	T	D	R	V	R	E	T	L	F	N	W	L	A	P	V	I	V	D	A	Q	C	L	D	C	F	A	G	S	G	A	L	G	L	E	A	L	S	R	Y	A
Query Conservation																		.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.																					.																															.
Template Conservation																																												.																															.
Template Sequence		R	S	K	S	D	V	S	Y	G	D	I	E	R	F	W	G	K	E	F	I	R	E	R	L	D	D	V	D	Y	L	I	H	P	N	S	F	F	Q	T	N	S	Y	.	Q	A	V	N	L	V	R	K	V	S	E	L	V	E	G	E	K	I	L	D	M	Y	S	G	V	G	T	F	G	I	.	Y	L	A	K	R	G
Template Known Secondary structure			S	S	S			S											S							T	T							T	T	S				S	B			.															S	S						T		T	T	T					.				T	T	T
Template Predicted Secondary structure																																												.																															.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	A	T	L	I	E	M	D	R	A	V	S	Q	Q	L	I	K	N	L	A	T	L	K	A	G	N	A	R	V	V	N	S	N	A	M	S	F	L	A	Q	K	G	T	P	H	N	I	V	F	V	D	P	P	F	R	R	G	L	L	E	E	T	I	N	L	L	E	D	N	G	W	L	A	D	E	A	L	I	Y
Query Conservation
Alig confidence																																										.	.	.	.											.															.	.	.
Template Conservation																																										.	.	.	.											.															.	.	.
Template Sequence		F	N	V	K	G	F	D	S	N	E	F	A	I	E	M	A	R	R	N	V	E	I	N	N	V	D	A	E	F	E	V	A	S	D	R	E	V	S	V	K	.	.	.	.	G	F	D	T	V	I	V	D	P	P	.	R	A	G	L	H	P	R	L	V	K	R	L	N	R	.	.	.	E	K	P	G	V	I	V	Y
Template Known Secondary structure									S															T	T										T	T	T				T	.	.	.	.	T		S								.	T	T		S											.	.	.				S
Template Predicted Secondary structure																																										.	.	.	.											.															.	.	.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.					.	.	.	.	.	.	.	340	.	.		.	.	.	.	.	.	.	350	.	.	.	.	.	.				.	.	.	360	.	.	.	.
		156	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	S	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	C	N	P
Template Known Secondary structure				S
Template Predicted Secondary structure
Template SS confidence
		365	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions