Job Description P0ADX9 Confidence 99.05% Date Thu Jan 5 11:22:04 GMT 2012 Rank 246 Aligned Residues 107 % Identity 16% Template c2q41D_ PDB info PDB header:transferase Chain: D: PDB Molecule:spermidine synthase 1; PDBTitle: ensemble refinement of the protein crystal structure of spermidine2 synthase from arabidopsis thaliana gene at1g23820 Resolution 2.70 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100					.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.
Predicted Secondary structure																								.																												.	.	.	.																				.
Query SS confidence																								.																												.	.	.	.																				.
Query Sequence		V	D	A	Q	C	L	D	C	F	A	G	S	G	A	L	G	L	E	A	L	S	R	.	Y	A	A	G	A	T	L	I	E	M	D	R	A	V	S	Q	Q	L	I	K	N	L	A	T	L	K	A	.	.	.	.	G	N	A	R	V	V	N	S	N	A	M	S	F	L	A	Q	K	G	T	.	P	H	N	I	V	F
Query Conservation																								.																												.	.	.	.																				.
Alig confidence																								.																												.	.	.	.																				.
Template Conservation
Template Sequence		N	P	K	K	V	L	V	I	G	G	G	D	G	G	V	L	R	E	V	A	R	H	A	S	I	E	Q	I	D	X	C	E	I	D	K	X	V	V	D	V	S	K	Q	F	F	P	D	V	A	I	G	Y	E	D	P	R	V	N	L	V	I	G	D	G	V	A	F	L	K	N	A	A	E	G	S	Y	D	A	V	I
Template Known Secondary structure		S								S		S	S	S							T	T		T	T																						T	T	T	G	G	G	T	T		T	T						S								S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		126	.	.	.	130	.	.	.	.	.						.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure												.	.	.	.	.
Query SS confidence												.	.	.	.	.
Query Sequence		V	D	P	P	F	R	R	G	L	L	.	.	.	.	.	E	E	T	I	N	L	L	E	D	N	G	W	L	A	D	E	A	L	I	Y	V	E	S	E	V
Query Conservation												.	.	.	.	.
Alig confidence												.	.	.	.	.									.	.
Template Conservation																									.	.
Template Sequence		V	D	S	S	D	P	I	G	P	A	K	E	L	F	E	K	P	F	F	Q	S	V	A	.	.	R	A	L	R	P	G	G	V	V	C	T	Q	A	E	S
Template Known Secondary structure							S	S	S	G	G	G	G	G	G	S									.	.
Template Predicted Secondary structure																									.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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