Job Description P0ADX9 Confidence 99.55% Date Thu Jan 5 11:22:04 GMT 2012 Rank 81 Aligned Residues 160 % Identity 14% Template c2pwyB_ PDB info PDB header:transferase Chain: B: PDB Molecule:trna (adenine-n(1)-)-methyltransferase; PDBTitle: crystal structure of a m1a58 trna methyltransferase Resolution 1.70 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.																.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.
Predicted Secondary structure																		.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Query SS confidence																		.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Query Sequence		G	Q	W	R	G	R	K	L	P	V	P	D	S	P	G	L	.	.	.	R	P	T	T	D	R	V	R	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	N	W	L	A	P	V	I	V	D	A	Q	C	L	D	C	F	A	G	S	G	A	L	G	L	E	A	L	S	R	.	.	Y	A	A
Query Conservation																		.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Alig confidence																		.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.																								.	.
Template Conservation																																																					.
Template Sequence		E	A	G	P	G	G	V	V	R	T	H	L	G	E	E	L	S	V	H	R	P	T	L	E	E	Y	L	L	H	M	K	R	S	A	T	P	T	Y	P	K	D	A	S	A	M	V	T	L	L	D	L	.	A	P	G	M	R	V	L	E	A	G	T	G	S	G	G	L	T	L	F	L	A	R	A	V	G	E	K	G
Template Known Secondary structure					T	T						T	T																		S			S	S															T	T		.		T	T									T	T	S											T	T	T	S
Template Predicted Secondary structure																																																					.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	T	L	I	E	M	D	R	A	V	S	Q	Q	L	I	K	N	L	A	T	L	K	A	G	N	A	R	V	V	N	S	N	A	M	S	F	L	A	Q	K	G	T	P	H	N	I	V	F	V	D	P	P	F	R	R	G	L	L	E	E	T	I	N	L	L	E	D	N	G	W	L	A	D	E	A	L	I	Y	V
Query Conservation
Alig confidence																																																																			.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.
Template Sequence		L	V	E	S	Y	E	A	R	P	H	H	L	A	Q	A	E	R	N	V	R	A	F	W	Q	V	E	N	V	R	F	H	L	G	K	L	E	E	A	E	L	E	E	A	A	Y	D	G	V	A	L	D	L	M	E	P	W	K	V	L	E	K	A	A	L	A	.	.	.	.	.	.	L	K	P	D	R	F	L	V	A
Template Known Secondary structure								S																										S		G	G	G					T	T									S	S		G	G	G	G								.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.							.	.	.	.	.	190	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	E	V	E	N	G	L	P	T	V	P	A	N	W	S	L	H	R	E	K	V	A	G	Q	V	A	Y	R	L	Y	Q
Query Conservation
Alig confidence																	.	.	.	.	.
Template Conservation																	.	.	.	.	.
Template Sequence		Y	L	P	N	I	T	Q	V	L	E	L	V	R	A	A	.	.	.	.	.	E	A	H	P	F	R	L	E	R	V	L	E
Template Known Secondary structure				S												G	.	.	.	.	.	G	G	T	T
Template Predicted Secondary structure																	.	.	.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.						.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions