Job Description P0ADX9 Confidence 99.16% Date Thu Jan 5 11:22:04 GMT 2012 Rank 235 Aligned Residues 100 % Identity 17% Template c2pssC_ PDB info PDB header:transferase Chain: C: PDB Molecule:spermidine synthase; PDBTitle: the structure of plasmodium falciparum spermidine synthase in its apo-2 form Resolution 2.20 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.					.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																								.																									.	.	.	.
Query SS confidence																								.																									.	.	.	.
Query Sequence		V	D	A	Q	C	L	D	C	F	A	G	S	G	A	L	G	L	E	A	L	S	R	.	Y	A	A	G	A	T	L	I	E	M	D	R	A	V	S	Q	Q	L	I	K	N	L	A	T	.	.	.	.	L	K	A	G	N	A	R	V	V	N	S	N	A	M	S	F	L	A	Q	K	G	T	P	H	N	I	V	F	V
Query Conservation																								.																									.	.	.	.
Alig confidence																								.																									.	.	.	.
Template Conservation
Template Sequence		E	P	K	N	V	L	V	V	G	G	G	D	G	G	I	I	R	E	L	C	K	Y	K	S	V	E	N	I	D	I	C	E	I	D	E	T	V	I	E	V	S	K	I	Y	F	K	N	I	S	C	G	Y	E	D	K	R	V	N	V	F	I	E	D	A	S	K	F	L	E	N	V	T	N	T	Y	D	V	I	I	V
Template Known Secondary structure		S										T	T									T		T	T									S																	G	G	G	G	S	T	T						S							T	T			S
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	P	F	R	R	G	L	L	E	E	T	I	N	L	L	E	D	N	G	W	L	A	D	E	A	L	I	Y	V	E	S	E	V
Query Conservation
Alig confidence			.	.	.												.	.	.	.	.	.
Template Conservation			.	.	.												.	.	.	.	.	.
Template Sequence		D	.	.	.	S	S	N	F	Y	E	K	I	Y	N	A	.	.	.	.	.	.	L	K	P	N	G	Y	C	V	A	Q	C	E	S
Template Known Secondary structure			.	.	.												.	.	.	.	.	.
Template Predicted Secondary structure			.	.	.												.	.	.	.	.	.
Template SS confidence
		196				.	.	.	200	.	.	.	.	.	.	.							.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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