Job Description P0ADX9 Confidence 99.74% Date Thu Jan 5 11:22:04 GMT 2012 Rank 32 Aligned Residues 168 % Identity 17% Template c2pjdA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribosomal rna small subunit methyltransferase c; PDBTitle: crystal structure of 16s rrna methyltransferase rsmc Resolution 2.10 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		I	I	G	G	Q	W	R	G	R	K	L	P	V	P	D	S	P	G	L	R	P	T	T	D	R	V	R	E	T	L	F	N	W	L	A	P	V	I	V	D	A	Q	C	L	D	C	F	A	G	S	G	A	L	G	L	E	A	L	S	R	Y	.	A	A	G	A	T	L	I	E	M	D	R	A	V	S	Q	Q	L	I
Query Conservation																																																															.
Alig confidence																																						.																									.
Template Conservation																																						.
Template Sequence		W	G	E	Y	S	V	D	G	L	T	V	K	T	L	P	G	V	F	S	R	D	G	L	D	V	G	S	Q	L	L	L	S	T	L	T	P	.	H	T	K	G	K	V	L	D	V	G	C	G	A	G	V	L	S	V	A	F	A	R	H	S	P	K	I	R	L	T	L	C	D	V	S	A	P	A	V	E	A	S	R
Template Known Secondary structure								T	T							T	T		T	T	S	S	S												S		T	.	T			S	B			B	T	T		T	T	S											T	T		B						S	B
Template Predicted Secondary structure																																						.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.							.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.
Query Sequence		K	N	L	A	T	L	K	A	G	N	A	R	V	V	N	S	N	A	M	S	F	L	A	Q	K	G	T	P	H	N	I	V	F	V	D	P	P	F	R	.	.	.	.	.	.	R	G	L	L	E	E	T	I	N	L	L	E	D	N	G	W	L	A	D	E	A	L	I	Y	V	E	S	E	V	E	N	G	L	P	T
Query Conservation																																									.	.	.	.	.	.
Alig confidence										.												.	.	.																	.	.	.	.	.	.													.	.
Template Conservation										.												.	.	.																																			.	.
Template Sequence		A	T	L	A	A	N	G	V	.	E	G	E	V	F	A	S	N	V	F	S	.	.	.	E	V	K	G	R	F	D	X	I	I	S	N	P	P	F	H	D	G	M	Q	T	S	L	D	A	A	Q	T	L	I	R	G	A	V	.	.	R	H	L	N	S	G	G	E	L	R	I	V	A	N	A	F	L	P	Y	P	D
Template Known Secondary structure							T	T		.								S	T	T	T	.	.	.	T			S													S	S	S															G	.	.	G	G													T	T	S	S
Template Predicted Secondary structure										.												.	.	.																																			.	.
Template SS confidence
		238	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.				.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290			.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	A	N	W	S	L	H	R	E	K	V	A	G	Q	V	A	Y	R	L	Y	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	D	E	T	F	G	F	H	E	V	I	A	Q	T	G	R	F	K	V	Y	R
Template Known Secondary structure								S									S	S
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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