Job Description P0ADX9 Confidence 75.87% Date Thu Jan 5 11:22:04 GMT 2012 Rank 453 Aligned Residues 80 % Identity 19% Template c2nvuB_ PDB info PDB header:protein turnover, ligase Chain: B: PDB Molecule:maltose binding protein/nedd8-activating enzyme PDBTitle: structure of appbp1-uba3~nedd8-nedd8-mgatp-ubc12(c111a), a2 trapped ubiquitin-like protein activation complex Resolution 2.80 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.					.	.	.	.	.	.	.	80	.	.																				.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																														.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	W	L	A	P	V	I	V	D	A	Q	C	L	D	C	F	A	G	S	G	A	L	G	L	E	A	L	S	.	.	.	.	R	Y	A	A	G	A	T	L	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	D	R	A	V	S	Q	Q	L	I	K	N	L	A	T	L	K	A	G
Query Conservation																														.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.								.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.
Template Sequence		E	S	L	Q	F	L	L	D	T	C	K	V	L	V	I	G	A	G	G	.	.	L	G	C	E	L	L	K	N	L	A	L	S	G	F	R	Q	I	H	V	I	D	M	D	T	I	D	V	S	N	L	N	R	Q	F	L	F	R	P	K	D	I	G	R	P	K	A	E	V	A	A	E	F	L	N	D	R	V	P	N
Template Known Secondary structure										T									S	S	.	.											T	T	T											B			G	G	G	G	G	T		T	T			G	G	G	T	T	S	B													S	T	T
Template Predicted Secondary structure																					.	.
Template SS confidence
		2040	.	.	.	.	.	.	.	.	.	2050	.	.	.	.	.	.	.	.			.	2060	.	.	.	.	.	.	.	.	.	2070	.	.	.	.	.	.	.	.	.	2080	.	.	.	.	.	.	.	.	.	2090	.	.	.	.	.	.	.	.	.	2100	.	.	.	.	.	.	.	.	.	2110	.	.	.	.	.	.	.
			102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	N	A	R	V	V	N	S	N	A	M	S	F	L	A	Q	K	G	T	P	H	N	I	V	F	V
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		C	N	V	V	P	H	F	N	K	I	Q	D	F	N	D	T	F	Y	R	Q	F	H	I	I	V	C
Template Known Secondary structure									S		G	G	G	S							T		S
Template Predicted Secondary structure
Template SS confidence
		2118	.	2120	.	.	.	.	.	.	.	.	.	2130	.	.	.	.	.	.	.	.	.	2140	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions