Job Description P0ADX9 Confidence 87.40% Date Thu Jan 5 11:22:04 GMT 2012 Rank 374 Aligned Residues 88 % Identity 14% Template c2hwkA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:helicase nsp2; PDBTitle: crystal structure of venezuelan equine encephalitis2 alphavirus nsp2 protease domain Resolution 2.45 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	W	L	A	P	V	I	V	D	A	Q	C	L	D	C	F	A	G	S	G	A	L	G	L	E	A	L	S	R	Y	A	A	G	A	T	L	I	E	M	D	R	A	V	S	Q	Q	L	I	K	N	L	A	T	L	K	A	G	N	A	R	V	V	N	S	N	A	M	S	F	L	A	Q	K	G	T	P	H	N	I
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation																					.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Sequence		F	S	S	F	V	S	K	L	K	G	R	T	V	L	V	V	G	E	K	.	.	.	.	.	.	.	.	L	S	V	P	G	K	M	V	D	W	L	S	D	R	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	T	F	R	A	R	L	D	L	G	.	I	P	G	D	V	P	K	Y	D	I
Template Known Secondary structure								T	S	S		S							S		.	.	.	.	.	.	.	.				T	T	S							S	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		S					G	G	G		.	S		T	T	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template SS confidence
		622	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640									.	.	.	.	.	.	.	.	.	650	.	.	.	.	.																	.	.	.	.	660	.	.	.	.	.	.		.	.	.	670	.	.	.	.	.	.
		124	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.									.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure							.	.															.	.	.	.	.	.	.	.
Query SS confidence							.	.															.	.	.	.	.	.	.	.
Query Sequence		V	F	V	D	P	.	.	P	F	R	R	G	L	L	E	E	T	I	N	L	L	.	.	.	.	.	.	.	.	E	D	N	G	W	L	A	D	E	A	L	I	Y	V
Query Conservation							.	.															.	.	.	.	.	.	.	.
Alig confidence							.	.															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	F	V	N	V	R	T	P	Y	K	Y	H	H	Y	Q	Q	C	E	D	H	A	I	K	L	S	M	L	T	K	K	A	C	L	H	L	N	P	G	G	T	C	V	S
Template Known Secondary structure												S																T					G	G	G
Template Predicted Secondary structure
Template SS confidence
		677	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions