Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADX9
Confidence64.78%DateThu Jan 5 11:22:04 GMT 2012
Rank492Aligned Residues86
% Identity12%Templatec2f00A_
PDB info PDB header:ligaseChain: A: PDB Molecule:udp-n-acetylmuramate--l-alanine ligase; PDBTitle: escherichia coli murc
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   45....50.........60.. ...... .70.........80.........90.........100.........110.........120..
Predicted Secondary structure 








.
.
















Query SS confidence 

















.





.





















































Query Sequence  NWLAPVIVDAQCLDCFAG. SGALGL. EALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHN
Query Conservation    
     
  



  
.

   
.

 



  
  

    
   
  
     
  
  
  
    
      

Alig confidence 

















.





.

















......





















....



Template Conservation           
 
  

 

 
 
 

  
   
  
   
    ......     
   

           ....   
Template Sequence  SIVPEXRRVRHIHFVGIGGAGXGGIAEVLANEGYQISGSDLAPN. . . . . . PVTQQLXNLGATIYFNHRPENV. . . . RDAS
Template Known Secondary structure  TTS


TT

TTTSTTTT

SS

......TT
SS

GGGG....TT
S
Template Predicted Secondary structure 

















......






....



Template SS confidence 















































































   11........20.........30.........40.........50.... .....60.........70...... ...80
 
   123..... .130.........140
Predicted Secondary structure 


..




Query SS confidence 





. .











Query Sequence  IVFVDP. . PFRRGLLEETIN
Query Conservation   
  

..

        
 
Alig confidence 





..











Template Conservation   

 



    
    
  
Template Sequence  VVVVSSAISADNPEIVAAHE
Template Known Secondary structure 
TT

TT
Template Predicted Secondary structure 







Template SS confidence 



















   81........90.........100
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions