Return to main results Retrieve Phyre Job Id

Job DescriptionP39310
Confidence98.09%DateThu Jan 5 11:59:16 GMT 2012
Rank5Aligned Residues43
% Identity23%Templated1y7ma2
SCOP infoLysM domain LysM domain LysM domain
Resolution2.05

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   130.........140.........150.........160.........170.......
Predicted Secondary structure 























Query SS confidence 















































Query Sequence  SYRVEPGKTMAQLFRDHGLPATDVYAMAQVEGAGKPLSNLQNGQMVKI
Query Conservation     
  



  
  
  
                 
  
 


 
  
Alig confidence 
































.....









Template Conservation   
 
  



  

  
 

   
   
     ..... 
  
  
 
Template Sequence  TYQVKQGDTLNSIAADFRISTAALLQANPSLQA. . . . . GLTAGQSIVI
Template Known Secondary structure 

TT

TTS






TS
TT
S.....S

TT
Template Predicted Secondary structure 













.....






Template SS confidence 















































   3......10.........20.........30..... ....40.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions