Return to main results Retrieve Phyre Job Id

Job DescriptionP39310
Confidence15.06%DateThu Jan 5 11:59:16 GMT 2012
Rank79Aligned Residues25
% Identity4%Templated1mkma1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Transcriptional regulator IclR, N-terminal domain
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   134.....140.........150........
Predicted Secondary structure 








Query SS confidence 
























Query Sequence  EPGKTMAQLFRDHGLPATDVYAMAQ
Query Conservation    



  
  
  
          
Alig confidence 
























Template Conservation      
  


  

   

  
 
 
Template Sequence  PGDVSVSEIAEKFNMSVSNAYKYMV
Template Known Secondary structure  SS
B
TT

Template Predicted Secondary structure 







Template SS confidence 
























   18.20.........30.........40..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions