Job Description P39310 Confidence 35.54% Date Thu Jan 5 11:59:16 GMT 2012 Rank 20 Aligned Residues 63 % Identity 8% Template d1hmja_ SCOP info RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5 Resolution UNK

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		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																																																						.	.
Query SS confidence																																																						.	.
Query Sequence		Y	R	V	E	P	G	K	T	M	A	Q	L	F	R	D	H	G	L	P	A	T	D	V	Y	A	M	A	Q	V	E	G	A	G	K	P	L	S	N	L	Q	N	G	Q	M	V	K	I	R	Q	N	A	S	.	.	G	V	V	T	G	L	T	I	D	T	G	N
Query Conservation																																																						.	.
Alig confidence																																						.																.	.
Template Conservation																																						.
Template Sequence		H	E	I	V	P	K	E	E	V	E	E	I	L	K	R	Y	N	I	K	I	Q	Q	L	P	K	I	Y	E	D	D	P	V	I	Q	E	I	.	G	A	K	E	G	D	V	V	R	V	I	R	K	S	P	T	A	G	V	S	I	A	Y	R	L	V	I	K	R
Template Known Secondary structure					T	T												T	S		T	T	S		S				T	T							T	.	T			T	T										S	S	S
Template Predicted Secondary structure																																						.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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