Job Description P39310 Confidence 13.32% Date Thu Jan 5 11:59:16 GMT 2012 Rank 94 Aligned Residues 74 % Identity 18% Template d1hh2p4 SCOP info Transcription factor NusA, N-terminal domain Transcription factor NusA, N-terminal domain Transcription factor NusA, N-terminal domain Resolution 2.1

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		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190																									.
Predicted Secondary structure																																														.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	T	M	A	Q	L	F	R	D	H	G	L	P	A	T	D	V	Y	A	M	A	Q	V	E	G	A	G	K	P	L	S	N	L	Q	N	G	Q	M	V	K	I	R	Q	N	.	A	S	G	V	V	T	G	L	T	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D
Query Conservation																																														.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																														.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	A	L	D	Q	L	E	E	E	K	G	I	S	K	E	E	V	I	P	I	L	E	K	A	L	V	S	A	Y	R	K	N	F	G	N	S	K	N	V	E	V	V	I	D	R	N	T	G	N	I	K	V	Y	Q	L	L	E	V	V	E	E	V	E	D	P	A	T	Q	I	S	L	E	E	A	K	K	I	D	P	L
Template Known Secondary structure		S	S	T	T	T	T	S	S	S	S																					T	T	T		S	S	S								S	T	T													S	S		S		T	T	S												T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	N	N	Q	Q	V	L	F	T	R	Q	P	D	G	S	F	I	R	A
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		A	E	V	G	S	I	V	K	K	E	L	N	V	K	.	N	F	G	R	I
Template Known Secondary structure				T	T											.		S	S	S
Template Predicted Secondary structure																.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions