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Job DescriptionP39310
Confidence97.15%DateThu Jan 5 11:59:16 GMT 2012
Rank6Aligned Residues76
% Identity16%Templatec1y7mB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:hypothetical protein bsu14040; PDBTitle: crystal structure of the b. subtilis ykud protein at 2 a2 resolution
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   130.........140.........150.........160.........170.........180.........190.........200.........
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Query Sequence  SYRVEPGKTMAQLFRDHGLPATDVYAMAQVEGAGKPLSNLQNGQMVKIRQNASGVVTGLTIDTGNNQQVLFTRQPDGSFI
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Template Sequence  TYQVKQGDTLNSIAADFRISTAALLQANPSLQA. . . . . GLTAGQSIVIPGLPDPYTIPYHIAVSIGAKTLTLSL. NNRVX
Template Known Secondary structure 

TT

TT

BTTBTTTS
TT
S.....S

TT
TT


GGGS
TTTT.TT
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   3......10.........20.........30..... ....40.........50.........60.........70. .....
 
   210.
Predicted Secondary structure 
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Query Sequence  RA
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Template Sequence  KT
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

   77.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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