Return to main results Retrieve Phyre Job Id

Job DescriptionP55140
Confidence15.36%DateThu Jan 5 12:06:10 GMT 2012
Rank21Aligned Residues74
% Identity19%Templated2d9ia1
SCOP infoIF3-like SMR domain-like Smr domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.. .......60... ......70. ........80.........90.......
Predicted Secondary structure 








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Query Sequence  QQVTDLTSSLNSQEKKELTHKLESIF. . . . . NNTQVQIAVLI. . . VPTTKDET. IEQYATRVFDNWRLGDAKRNDGILIV
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Template Sequence  QNVLDLHGLHVDEALEHLMRVLEKKTEEFKQNGGKPYLSVITGRGNHSQGGVARIKPAVIKYLISHSFRFSEIKPGCLKV
Template Known Secondary structure 


TTS
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S


SGGGTT
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STT
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   8.10.........20.........30.........40.........50.........60.........70.........80.......
 
   98.100
Predicted Secondary structure 
Query SS confidence 


Query Sequence  VAW
Query Conservation 

 
Alig confidence 


Template Conservation   

Template Sequence  MLK
Template Known Secondary structure 

Template Predicted Secondary structure 
Template SS confidence 


   88.90
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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