Job Description P55140 Confidence 8.52% Date Thu Jan 5 12:06:10 GMT 2012 Rank 48 Aligned Residues 88 % Identity 19% Template d1ta8a_ SCOP info ATP-grasp DNA ligase/mRNA capping enzyme, catalytic domain Adenylation domain of NAD+-dependent DNA ligase Resolution 1.80

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.																										.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	V	T	D	L	T	S	S	L	N	S	Q	E	K	K	E	L	T	H	K	L	E	S	I	F	N	N	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	V	Q	I	A	V	L	I	V	P	T	T	K	D	E	T	I	E	Q	Y	A	T	R	V	F	D	N
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	Y	V	K	D	Q	P	S	V	E	D	Y	V	Y	D	R	L	Y	K	E	L	V	D	I	E	T	E	F	P	D	L	I	T	P	D	S	P	T	Q	R	V	G	G	K	V	L	S	G	F	E	K	A	P	H	D	I	P	M	Y	S	L	N	D	G	F	S	K	E	D	I	F	A	F	D	E	R	V	R	K	A
Template Known Secondary structure				T	S	S			S	S																				G	G	G			T	T		G	G	G	G	G				B		S	S							S	S										S
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		83					.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.		110	.	.	.	.	.
Predicted Secondary structure			.	.	.	.																						.						.
Query SS confidence			.	.	.	.																						.						.
Query Sequence		W	.	.	.	.	R	L	G	D	A	K	R	N	D	G	I	L	I	V	V	A	W	S	D	R	T	.	V	R	I	Q	V	.	G	Y	G	L	E	E
Query Conservation			.	.	.	.																						.						.
Alig confidence			.	.	.	.																						.						.
Template Conservation
Template Sequence		I	G	K	P	V	A	Y	C	C	E	L	K	I	D	G	L	A	I	S	L	R	Y	E	N	G	V	F	V	R	G	A	T	R	G	D	G	T	V	G
Template Known Secondary structure			S	S												S									T	T									T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions