Return to main results Retrieve Phyre Job Id

Job DescriptionP55140
Confidence6.08%DateThu Jan 5 12:06:10 GMT 2012
Rank73Aligned Residues19
% Identity37%Templated1sd4a_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.........50....
Predicted Secondary structure 

Query SS confidence 


















Query Sequence  LNSQEKKELTHKLESIFNN
Query Conservation 

      
   
  

  
Alig confidence 


















Template Conservation 

  

  
  

     
Template Sequence  LNNKEIEELRDILNDISKK
Template Known Secondary structure  S



Template Predicted Secondary structure 



Template SS confidence 


















   108.110.........120......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions