Job Description P55140 Confidence 9.98% Date Thu Jan 5 12:06:10 GMT 2012 Rank 39 Aligned Residues 58 % Identity 7% Template c3gdwA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:sigma-54 interaction domain protein; PDBTitle: crystal structure of sigma-54 interaction domain protein from2 enterococcus faecalis Resolution 2.00 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	H	K	L	E	S	I	F	N	N	T	Q	V	Q	I	A	V	L	I	V	P	T	T	K	D	E	T	I	E	Q	Y	A	T	R	V	F	D	N	W	R	L	G	D	A	K	R	N	D	G	I	L	I	V	V	A	W	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	S	S	X	L	K	T	A	Q	E	L	L	G	T	S	I	G	T	A	X	N	X	P	L	T	X	E	V	Q	T	X	Y	E	Q	L	R	N	Q	V	I	T	Q	K	E	S	L	N	N	G	I	L	L	L	T	D	X	G
Template Known Secondary structure															T											T	T	S															T	S	T	G	G	G	T	T								S	G
Template Predicted Secondary structure
Template SS confidence
		556	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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