Job Description P55140 Confidence 100.00% Date Thu Jan 5 12:06:10 GMT 2012 Rank 2 Aligned Residues 138 % Identity 29% Template c2kw7A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved domain protein; PDBTitle: solution nmr structure of the n-terminal domain of protein pg_03612 from p.gingivalis, northeast structural genomics consortium target3 pgr37a Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	L	Q	Q	Q	V	T	D	L	T	S	S	L	N	S	Q	E	K	K	E	L	T	H	K	L	E	S	I	F	N	N	T	Q	V	Q	I	A	V	L	I	V	P	T	T	K	D	E	T	I	E	Q	Y	A	T	R	V	F	D	N	W	R	L	G	D	A	K	R	N	D	G	I	L	I	V	V	A	W	S	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	D	S	T	R	L	V	T	D	E	A	G	L	L	S	N	A	Q	E	E	V	M	N	G	R	L	R	A	I	R	S	S	H	A	V	E	F	A	V	V	T	L	P	S	I	G	D	A	P	L	E	D	F	T	L	K	L	A	R	Q	W	G	V	G	N	E	K	N	N	N	G	L	L	L	V	L	V	L	D	Q
Template Known Secondary structure		T		T	T	T						S	S		S																			T										S	B		T	T															S	T	T	T	T	S		T	T								T	T	T
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	V	R	I	Q	V	G	Y	G	L	E	E	K	V	T	D	A	L	A	G	D	I	I	R	S	N	M	I	P	A	F	K	Q	Q	K	L	A	K	G	L	E	L	A	I	N	A	L	N	N	Q	L	T	S	Q	H	Q	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	R	V	R	F	E	T	G	Y	G	L	E	G	Y	L	P	D	G	L	L	S	R	I	I	H	D	R	M	I	P	H	F	R	S	G	N	Y	A	E	G	L	S	E	G	V	L	A	V	Q	Q	V	L	D	G	S	L	E	H
Template Known Secondary structure		T								S	T	T	T	T	T													T								T																							S
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions