Job Description P55140 Confidence 14.41% Date Thu Jan 5 12:06:10 GMT 2012 Rank 25 Aligned Residues 60 % Identity 13% Template c2j37W_ PDB info PDB header:ribosome Chain: W: PDB Molecule:signal recognition particle 54 kda protein PDBTitle: model of mammalian srp bound to 80s rncs Resolution 8.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	D	L	T	S	S	L	N	S	Q	E	K	K	E	L	T	H	K	L	E	S	I	F	N	N	T	Q	V	Q	I	A	V	L	I	V	P	T	T	K	D	E	T	I	E	Q	Y	A	T	R	V	F	D	N	W	R	L	G	D	A	K	R	N	D	G	I	L	I
Query Conservation
Alig confidence										.	.																																																.	.	.	.	.	.
Template Conservation										.	.																																																.	.	.	.	.	.
Template Sequence		I	V	D	T	S	G	R	H	.	.	K	Q	E	D	S	L	F	E	E	M	L	Q	V	A	N	A	I	Q	P	D	N	I	V	Y	V	M	D	A	S	I	G	Q	A	C	E	A	Q	A	K	A	F	K	D	K	V	D	V	.	.	.	.	.	.	A	S	V	I	V
Template Known Secondary structure										.	.	T	T																		S								T	T			T	T															.	.	.	.	.	.
Template Predicted Secondary structure										.	.																																																.	.	.	.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.							.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions