Job Description P37001 Confidence 5.11% Date Thu Jan 5 11:54:10 GMT 2012 Rank 53 Aligned Residues 60 % Identity 13% Template d1ncqa_ SCOP info Nucleoplasmin-like/VP (viral coat and capsid proteins) Positive stranded ssRNA viruses Picornaviridae-like VP (VP1, VP2, VP3 and VP4) Resolution 2.50

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		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	W	N	K	W	E	P	I	A	G	Y	G	W	E	S	T	W	R	P	L	A	D	E	N	F	H	L	G	L	G	F	T	A	G	V	T	A	R	D	N	W	N	Y	I	P	L	P	V	L	L	P	L	A	S	V	G	Y	G	P	V	T	F	Q	M	T	Y	I	P	G	T
Query Conservation
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	F	N	D	W	K	I	N	L	S	S	L	V	Q	L	R	K	K	L	E	L	F	T	Y	V	R	F	D	S	E	Y	T	I	L	A	T	A	S	Q	P	D	S	A	N	Y	S	S	N	.	.	.	.	.	.	.	.	.	.	.	L	V	V	Q	A	M	Y	V	P	P	G
Template Known Secondary structure		T	S								S		S	S								T	T																				S			S	S				.	.	.	.	.	.	.	.	.	.	.										T	T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.												.	.	.	.	150	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions