Job Description P37001 Confidence 10.72% Date Thu Jan 5 11:54:10 GMT 2012 Rank 26 Aligned Residues 45 % Identity 22% Template d1cov1_ SCOP info Nucleoplasmin-like/VP (viral coat and capsid proteins) Positive stranded ssRNA viruses Picornaviridae-like VP (VP1, VP2, VP3 and VP4) Resolution 3.50

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160				.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																											.																						.	.	.
Query SS confidence																											.																						.	.	.
Query Sequence		E	S	T	W	R	P	L	A	D	E	N	F	H	L	G	L	G	F	T	A	G	V	T	A	R	.	D	N	W	N	Y	I	P	L	P	V	L	L	P	L	A	S	V	G	Y	G	P	.	.	.	V	T	F	Q	M	T	Y	I	P	G	T
Query Conservation																											.																						.	.	.
Alig confidence																											.			.	.	.	.	.	.	.	.	.	.	.	.								.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	L	R	R	K	L	E	F	F	T	Y	V	R	F	D	L	E	L	T	F	V	I	T	S	T	Q	Q	P	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T	Q	N	Q	D	A	Q	I	L	T	H	Q	I	M	Y	V	P	P	G
Template Known Secondary structure								T	T																					.	.	.	.	.	.	.	.	.	.	.	.		S			S															T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.													.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions