Return to main results Retrieve Phyre Job Id

Job DescriptionP60782
Confidence1.88%DateThu Jan 5 12:07:10 GMT 2012
Rank96Aligned Residues42
% Identity12%Templated1nkza_
SCOP infoLight-harvesting complex subunits Light-harvesting complex subunits Light-harvesting complex subunits
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   46...50.........60.........70.........80.......
Predicted Secondary structure 




Query SS confidence 









































Query Sequence  VLRIGGKGAAVAVLIFDVLKGMLPVWGAYELGVSPFWLGLIA
Query Conservation 
 
  
   

 
   
  

 
 
 

           
  
Alig confidence 









































Template Conservation 



















 
  

  

  


   
  
Template Sequence  IWTVVNPAIGIPALLGSVTVIAILVHLAILSHTTWFPAYWQG
Template Known Secondary structure  GGGTS

S
Template Predicted Secondary structure 



Template SS confidence 









































   6...10.........20.........30.........40.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions