 |
Job Description | P0AB03 | Confidence | 4.89% | Date | Thu Jan 5 11:14:16 GMT 2012 |
Rank | 62 | Aligned Residues | 28 |
% Identity | 25% | Template | d1twfh_ |
SCOP info | OB-fold
| Nucleic acid-binding proteins
| RNA polymerase subunit RBP8
|
Resolution | 2.30 |
|
  |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | |
. | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
| . |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | K | L | S | R | I | E | C | V | N | E | K | A | D | . |
T | A | L | W | A | L | Y | D | S | Q | G | N | P | M |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
N | K | V | C | R | I | E | A | A | S | T | T | Q | D | Q | C | K | L | T | L | D | I | N | V | E | L | F | P | V |
Template Known Secondary structure |   |
S | S |  |  |  |  |  |  |  |  | S | S |
| S | S |
|  |  |  |  |  |  |  | G | G | G | S |
|
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|