Job Description P0AB03 Confidence 3.85% Date Thu Jan 5 11:14:16 GMT 2012 Rank 78 Aligned Residues 69 % Identity 19% Template c3rf2A_ PDB info PDB header:ribosomal protein Chain: A: PDB Molecule:30s ribosomal protein s8; PDBTitle: crystal structure of 30s ribosomal protein s8 from aquifex aeolicus Resolution 2.16 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																								.	.	.	.																										.	.
Query SS confidence																								.	.	.	.																										.	.
Query Sequence		K	L	S	R	I	E	C	V	N	E	K	A	D	T	A	L	W	A	L	Y	D	S	.	.	.	.	Q	G	N	P	M	P	L	M	A	R	S	F	S	T	P	G	K	A	R	Q	L	A	W	K	T	.	.	T	M	L	A	R	S	G	T	V	R	M	P	T	I	Y	G	V	M	T	H	E	E
Query Conservation																								.	.	.	.																										.	.
Alig confidence																								.	.	.	.																										.	.
Template Conservation
Template Sequence		Y	L	K	Q	L	E	E	Y	N	K	G	T	Q	Y	P	I	K	I	Y	L	K	Y	L	D	P	K	K	R	K	S	A	I	T	N	I	V	K	V	S	K	G	G	R	R	V	Y	A	G	V	R	T	M	P	Y	V	K	R	G	L	G	I	A	I	V	S	T	D	A	G	V	M	T	D	H	E
Template Known Secondary structure									T	T	S	T	T										B	S	S	T	T	S		S	B	S		S						S		S	S	S						S	T	T				S	G	G	G	T	S							T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions