Job Description P0AB03 Confidence 97.02% Date Thu Jan 5 11:14:16 GMT 2012 Rank 5 Aligned Residues 262 % Identity 14% Template c3ovcA_ PDB info PDB header:transferase/antibiotic Chain: A: PDB Molecule:hygromycin-b 4-o-kinase; PDBTitle: crystal structure of aminoglycoside phosphotransferase aph(4)-ia Resolution 1.95 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	R	A	E	L	S	H	L	L	G	E	K	L	S	R	I	E	C	V	N	E	K	A	D	T	A	L	W	A	L	Y	D	S	Q	G	N	P	M	P	L	M	A	R	S	F	S	T	P	G	K	A	R	Q	L	A	W	K	T	T	M	L	A	R	S	G	T	V	R	M	P	T	I	Y	G	V	M	T	H	E
Query Conservation
Alig confidence														.																								.	.	.																												.									.	.
Template Conservation														.																								.	.	.																												.									.	.
Template Sequence		S	V	E	K	F	L	I	E	K	F	D	S	.	V	S	D	L	X	Q	L	S	E	G	E	E	S	R	A	F	S	F	D	V	G	G	R	.	.	.	G	Y	V	L	R	V	N	S	C	A	D	G	F	Y	K	D	R	Y	V	Y	R	H	F	A	S	A	A	.	L	P	I	P	E	V	L	D	.	.	I	G	E
Template Known Secondary structure											S	S		.											S	S									T	T		.	.	.								S																		S	S	.	S								.	.
Template Predicted Secondary structure														.																								.	.	.																												.									.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.			80	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		E	H	P	G	P	D	V	L	L	L	E	R	M	R	G	V	S	V	E	A	P	A	R	T	P	E	R	W	E	Q	L	K	D	Q	I	V	E	A	L	L	A	W	H	R	Q	D	S	R	G	C	V	G	A	V	D	.	N	T	Q	E	N	F	W	P	S	W	Y	R	Q	H	V	E	V	L	W	T	T	L	N	Q
Query Conservation																																																									.
Alig confidence																							.	.																																	.
Template Conservation																							.	.
Template Sequence		F	S	E	S	L	T	Y	C	I	S	R	R	A	Q	G	V	T	L	Q	D	L	.	.	P	E	T	E	L	P	A	V	L	Q	P	V	A	E	A	X	D	A	I	A	A	A	D	L	S	Q	T	S	G	F	G	P	F	G	P	Q	G	I	G	Q	Y	T	T	W	R	D	F	I	C	A	I	A	D	P	H	V	Y
Template Known Secondary structure		S	S	S	S											S			T	T	T	S	.	.		G	G	G	S	G	G	G																	T	T		B							T	T	S	B				S	S							G	G	G		T	T	T
Template Predicted Secondary structure																							.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.				.	.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.
Query SS confidence																																																																									.	.	.
Query Sequence		F	N	N	T	G	L	T	M	Q	D	K	R	I	L	F	R	T	R	E	C	L	P	A	L	F	E	G	F	N	D	N	C	V	L	I	H	G	N	F	C	L	R	S	M	L	K	D	S	R	S	D	Q	L	L	A	M	V	G	P	G	L	M	L	W	A	P	R	E	Y	E	L	.	.	.	F	R	L	M	D	N
Query Conservation																																																																									.	.	.
Alig confidence																																																	.	.																							.	.	.
Template Conservation																																																	.	.
Template Sequence		H	W	Q	T	V	X	D	D	T	V	S	A	S	V	A	Q	A	L	D	E	L	X	L	W	A	E	D	C	P	E	V	R	H	L	V	H	A	D	F	G	S	N	N	V	L	T	D	.	.	N	G	R	I	T	A	V	I	D	W	S	E	A	X	F	G	D	S	Q	Y	E	V	A	N	I	F	F	W	R	P	W
Template Known Secondary structure									T	T	T															G	G	G										S	S		S	S	T	T					.	.	T	T									T	T						T											T	T	T
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	A	E	D	L	L	W	S	Y	L	Q	R	A	P	V	A	E	S	F	I	W	R	R	W	L	Y	V	L	W	D	E	V	A	Q	L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	C	X	E	Q	Q	T	R	Y	F	E	R	R	H	P	E	L	A	G	S	P	R	L	R	A	Y	X	L	R	I	G	L	D	Q	L	Y
Template Known Secondary structure																	S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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