Job Description P0AB03 Confidence 96.17% Date Thu Jan 5 11:14:16 GMT 2012 Rank 8 Aligned Residues 280 % Identity 14% Template c3hamA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminoglycoside phosphotransferase; PDBTitle: structure of the gentamicin-aph(2")-iia complex Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		M	E	Q	L	R	A	E	L	S	H	L	L	.	.	G	E	K	L	S	R	I	E	C	V	N	E	K	A	D	T	A	L	W	A	L	Y	D	S	Q	G	N	P	M	P	L	M	A	R	S	F	S	T	P	G	K	A	R	Q	L	A	W	K	T	T	M	L	A	R	S	G	T	V	R	M	P	T	I	Y	G	V
Query Conservation														.	.
Alig confidence														.	.																						.	.	.				.	.	.
Template Conservation																																					.	.	.				.	.	.
Template Sequence		M	V	N	L	D	A	E	I	Y	E	H	L	N	K	Q	I	K	I	N	E	L	R	Y	L	S	S	G	D	D	S	D	T	F	L	C	.	.	.	N	E	Q	.	.	.	Y	V	V	K	V	P	K	R	D	S	V	R	I	S	Q	K	R	E	F	E	L	Y	R	F	L	E	N	C	K	L	S	Y	Q	I	P	A
Template Known Secondary structure																	S			S									S	S							.	.	.	T	T	T	.	.	.							S	S	S																	T	T	S			S	S	B
Template Predicted Secondary structure																																					.	.	.				.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.				.	.	.				.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	H	E	E	H	P	G	P	D	V	L	L	L	E	R	M	R	G	V	S	V	E	A	P	A	R	T	P	E	R	W	E	Q	L	K	D	Q	I	V	E	A	L	L	A	W	H	R	Q	D	S	R	G	C	V	G	A	V	D	N	T	Q	E	N	F	W	P	S	W	Y	R	Q	H	V	E	V	L	W	T	T
Query Conservation
Alig confidence																																																																		.
Template Conservation																																																																		.
Template Sequence		V	V	Y	Q	S	D	R	F	N	I	M	K	Y	I	K	G	E	R	I	T	Y	E	Q	Y	H	K	L	S	E	K	E	K	D	A	L	A	Y	D	E	A	T	F	L	K	E	L	H	S	I	E	I	D	C	S	V	S	L	F	S	D	A	L	V	N	.	K	K	D	K	F	L	Q	D	K	K	L	L	I	S	I
Template Known Secondary structure							S	S										B								T	T	S																						S				T	T	S					T	T	B			.
Template Predicted Secondary structure																																																																		.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		L	N	Q	F	N	N	T	G	L	T	M	Q	D	K	R	I	L	F	R	T	R	E	C	L	P	A	L	F	E	G	F	N	D	N	C	V	L	I	H	G	N	F	C	L	R	S	M	L	K	D	S	R	S	D	Q	L	L	A	M	V	G	P	G	L	M	L	W	A	P	R	E	Y	E	L	F	R	L	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence							.	.																																													.	.																									.	.	.
Template Conservation							.	.																																													.	.
Template Sequence		L	E	K	E	Q	.	.	L	L	T	D	E	M	L	E	H	I	E	T	I	Y	E	N	I	L	N	N	A	V	L	F	K	Y	T	P	C	L	V	H	N	D	F	S	A	N	N	M	I	F	R	N	.	.	N	R	L	F	G	V	I	D	F	G	D	F	N	V	G	D	P	D	N	D	F	L	C	L	L	D	C
Template Known Secondary structure					T	T	.	.																			T		G	G	G	G									S			S	G	G	G					T	.	.	T									T	T						G	G	G	G	T	T	T	T	T	S	S
Template Predicted Secondary structure							.	.																																													.	.
Template SS confidence
		154	.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
						236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	M	D	N	S	L	A	E	D	L	L	W	S	Y	L	Q	R	A	P	V	A	E	S	F	I	W	R	R	W	L	Y	V	L	W	D	E	V	A	Q	L	V	N	T	G	R	F	S	R	R	N	F	D	L	A	S	K	S	L	L
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																			.	.
Template Conservation																								.	.
Template Sequence		S	T	D	D	F	G	K	E	F	G	R	K	V	L	K	Y	Y	Q	H	K	A	P	.	.	E	V	A	E	R	K	A	E	L	N	D	V	Y	W	S	I	D	Q	I	I	Y	G	Y	E	R	K	D	R	E	M	L	I	K	G	V	S	E	L
Template Known Secondary structure		S	S	S	S	S											T	T	T		S			.	.													T												T	T
Template Predicted Secondary structure																								.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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