Job Description P0AB03 Confidence 10.72% Date Thu Jan 5 11:14:16 GMT 2012 Rank 38 Aligned Residues 193 % Identity 13% Template c3dxqB_ PDB info PDB header:transferase Chain: B: PDB Molecule:choline/ethanolamine kinase family protein; PDBTitle: crystal structure of choline/ethanolamine kinase family protein2 (np_106042.1) from mesorhizobium loti at 2.55 a resolution Resolution 2.55 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	R	S	G	T	V	R	M	P	T	I	Y	G	V	M	T	H	E	E	H	P	G	P	D	V	L	L	L	E	R	M	R	G	V	S	V	E	A	P	A	R	T	P	E	R	W	E	Q	L	K	D	Q	I	V	E	A	L	L	A	W	H	R	Q	D	S	R	G	C	V	G	A	V	D	N	T	Q	E	N	F
Query Conservation
Alig confidence								.	.								.	.	.	.	.																						.																														.	.	.	.	.	.	.	.	.
Template Conservation								.	.								.	.	.	.	.																						.																														.	.	.	.	.	.	.	.	.
Template Sequence		A	A	K	A	G	V	.	.	S	P	E	V	L	H	V	.	.	.	.	.	D	P	A	T	G	V	X	V	T	R	Y	I	A	G	A	Q	T	X	S	P	E	.	K	F	K	T	R	P	G	S	P	A	R	A	G	E	A	F	R	K	L	H	G	S	G	A	V	F	P	F	R	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					T	T	S	.	.	S							.	.	.	.	.		T	T	T									T	T								.					S	T	T														T	S					S	S	B	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure								.	.								.	.	.	.	.																						.																														.	.	.	.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.			70	.	.	.	.	.	.						.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	P	S	W	Y	R	Q	H	V	E	V	L	W	T	T	L	N	Q	F	N	N	T	G	L	T	M	Q	D	K	R	I	L	F	R	T	R	E	C	L	P	A	L	F	E	G	F	N	D	N	C	V	L	I	H	G	N	F	C	L	R	S	M	L	K	D	S	R	S	D	Q	L	L	A	M	V	G	P	G	L	M
Query Conservation
Alig confidence		.	.																.	.																																																		.	.	.
Template Conservation		.	.																.	.																																																		.	.	.
Template Sequence		.	.	F	E	L	F	A	X	I	D	D	Y	L	K	V	L	S	.	.	T	K	N	V	T	L	P	A	G	Y	H	D	V	V	R	E	A	G	G	V	R	S	A	L	A	A	H	P	L	P	L	A	A	C	H	C	D	P	L	C	E	N	F	L	D	T	G	E	R	.	.	.	X	W	I	V	D	W	E	Y	S
Template Known Secondary structure		.	.															T	.	.	T							T	T																	T	S									S				G	G	G					S	S		.	.	.							T	T
Template Predicted Secondary structure		.	.																.	.																																																		.	.	.
Template SS confidence
				127	.	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190				.	.	.	.	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.						.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.								.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure														.	.	.	.	.																													.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.																													.	.	.	.	.	.	.
Query Sequence		L	W	A	P	R	E	Y	E	L	F	R	L	.	.	.	.	.	M	D	N	S	L	A	E	D	L	L	W	S	Y	L	Q	R	A	P	V	A	E	S	F	I	W	R	R	W	.	.	.	.	.	.	.	L	Y	V	L	W	D	E	V	A	Q	L	V	N	T	G	R	F
Query Conservation														.	.	.	.	.																													.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.																													.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	X	N	D	P	L	W	D	L	G	D	L	S	V	E	G	K	F	N	A	N	Q	D	E	E	L	X	R	A	Y	F	G	G	E	A	R	P	A	E	R	G	R	V	V	I	Y	K	A	X	C	D	L	L	W	T	L	W	G	L	I	Q	L	A	N	D	N	P	V	D
Template Known Secondary structure																	T	T															T	S																															T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions