Job Description P0AB03 Confidence 97.61% Date Thu Jan 5 11:14:16 GMT 2012 Rank 2 Aligned Residues 234 % Identity 17% Template c3csvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminoglycoside phosphotransferase; PDBTitle: crystal structure of a putative aminoglycoside phosphotransferase2 (yp_614837.1) from silicibacter sp. tm1040 at 2.15 a resolution Resolution 2.15 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		W	A	L	Y	D	S	Q	G	N	P	M	P	L	M	A	R	S	F	S	T	P	G	K	A	R	Q	L	A	W	K	T	T	M	L	A	R	S	G	T	V	R	M	P	T	I	Y	G	V	M	T	H	E	E	H	P	G	P	D	V	L	L	L	E	R	M	R	G	V	S	.	V	E	A	P	A	R	T	P	E	R
Query Conservation																																																																							.
Alig confidence																																								.											.	.	.	.	.																.
Template Conservation																																								.											.	.	.	.	.
Template Sequence		Q	R	L	R	S	P	T	G	A	K	A	V	L	X	D	W	S	P	E	E	G	G	D	T	Q	P	F	V	D	L	A	Q	Y	L	R	N	L	D	.	I	S	A	P	E	I	Y	A	E	E	.	.	.	.	.	H	A	R	G	L	L	L	I	E	D	L	G	D	A	L	F	T	E	V	I	N	N	D	P	A	Q
Template Known Secondary structure							T	T											T	T	T	T			S													T	T	.		B									.	.	.	.	.	T	T	T	T									S		B									G	G	G
Template Predicted Secondary structure																																								.											.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.						.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	E	Q	L	K	D	Q	I	V	E	A	L	L	A	W	H	R	Q	D	S	R	G	C	V	G	A	V	D	N	T	Q	E	N	F	W	P	S	W	Y	R	Q	H	V	E	V	L	W	T	T	L	N	Q	F	N	N	T	G	L	T	M	Q	D	K	R	I	L	F	R	T	R	E	C	L	P	A	L	F	E	G	F
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.
Template Sequence		E	X	P	L	Y	R	A	A	V	D	L	L	I	H	L	H	D	A	Q	T	P	E	L	.	.	.	.	.	.	.	.	A	R	L	D	P	E	T	L	S	E	X	T	R	L	A	F	S	E	Y	R	Y	A	I	L	G	D	A	A	E	D	N	R	K	R	F	E	H	R	F	A	Q	I	L	S	A	Q	L	E	G
Template Known Secondary structure																		T	S						.	.	.	.	.	.	.	.		B									T	T	T					T							S	S																							S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.									.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.			.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.								.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure																											.	.																									.	.	.	.	.	.	.
Query SS confidence																											.	.																									.	.	.	.	.	.	.
Query Sequence		N	D	N	C	V	L	I	H	G	N	F	C	L	R	S	M	L	K	D	S	R	S	D	Q	L	.	.	L	A	M	V	G	P	G	L	M	L	W	A	P	R	E	Y	E	L	F	R	L	M	D	N	.	.	.	.	.	.	.	S	L	A	E	D	L	L	W	S	Y	L	Q	R	A	P	V	A	E	S	F	I	W
Query Conservation																											.	.																									.	.	.	.	.	.	.
Alig confidence			.	.																							.	.																									.	.	.	.	.	.	.
Template Conservation			.	.
Template Sequence		D	.	.	X	V	F	V	H	R	D	F	H	A	Q	N	L	L	W	L	P	E	R	E	G	L	A	R	V	G	V	I	D	F	Q	D	A	K	L	G	H	R	A	Y	D	L	V	S	L	L	Q	D	A	R	R	D	V	P	A	Q	V	E	A	Q	X	I	D	H	Y	I	Q	A	T	G	V	D	E	S	H	F	R
Template Known Secondary structure			.	.						S			S	G	G	G					T	T	S		G	G	G	G							T	T						T	T								S		T	T	S																			T
Template Predicted Secondary structure			.	.
Template SS confidence
		181			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	W	L	Y	V	L	W	D	E	V	A	Q	L	V	N	T	G	R	F	S	R
Query Conservation
Alig confidence																	.	.
Template Conservation																	.	.
Template Sequence		S	A	Y	A	V	I	A	V	Q	R	N	X	R	I	L	.	.	G	I	F	A	R
Template Known Secondary structure																	.	.
Template Predicted Secondary structure																	.	.
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.			.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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