Job Description P0AB03 Confidence 12.23% Date Thu Jan 5 11:14:16 GMT 2012 Rank 31 Aligned Residues 51 % Identity 22% Template c3bbnH_ PDB info PDB header:ribosome Chain: H: PDB Molecule:ribosomal protein s8; PDBTitle: homology model for the spinach chloroplast 30s subunit2 fitted to 9.4a cryo-em map of the 70s chlororibosome. Resolution 9.40 Å

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		33	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure													.	.																						.	.
Query SS confidence													.	.																						.	.
Query Sequence		L	Y	D	S	Q	G	N	P	M	P	L	.	.	M	A	R	S	F	S	T	P	G	K	A	R	Q	L	A	W	K	T	T	M	L	.	.	A	R	S	G	T	V	R	M	P	T	I	Y	G	V	M	T	H	E	E
Query Conservation													.	.																						.	.
Alig confidence													.	.																						.	.
Template Conservation
Template Sequence		H	R	R	N	K	K	G	P	Y	L	N	T	F	H	L	K	R	V	S	R	P	G	L	R	I	Y	S	N	Y	Q	R	I	P	R	I	L	G	G	M	G	I	A	I	L	S	T	S	R	G	I	M	T	D	R	E
Template Known Secondary structure		B				S	S	S			B	S		S					S	S	B	T	T	B						S	S	S				G	G	G	T	T	S							S	S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions