Job Description P0AB03 Confidence 36.25% Date Thu Jan 5 11:14:16 GMT 2012 Rank 16 Aligned Residues 68 % Identity 19% Template c2xznH_ PDB info PDB header:ribosome Chain: H: PDB Molecule:ribosomal protein s8 containing protein; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 Resolution 3.93 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		L	S	R	I	E	C	V	N	E	K	A	D	T	A	L	W	A	L	Y	D	S	Q	G	N	P	M	P	L	M	A	R	S	F	S	T	P	G	K	A	R	Q	L	A	W	K	T	T	M	L	A	R	S	.	G	T	V	R	M	P	T	I	Y	G	V	M	T	H	E	E
Query Conservation																																																						.
Alig confidence																																																						.
Template Conservation
Template Sequence		I	G	E	F	E	V	I	D	D	H	R	S	K	K	V	V	V	E	L	I	G	R	I	N	K	C	G	V	I	S	P	R	Y	D	V	P	L	A	D	F	E	K	W	T	N	N	I	L	P	S	R	Q	F	G	N	V	V	L	T	T	T	Y	G	I	L	T	H	E	E
Template Known Secondary structure		S									S	S	S									S									T	T			B			G	G	G									S	S	S	T	T									S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions