Job Description P0AB03 Confidence 7.40% Date Thu Jan 5 11:14:16 GMT 2012 Rank 51 Aligned Residues 70 % Identity 21% Template c2f5xC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:bugd; PDBTitle: structure of periplasmic binding protein bugd Resolution 1.72 Å

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		47	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.					.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.																																																			.	.	.	.
Query SS confidence													.	.																																																			.	.	.	.
Query Sequence		S	F	S	T	P	G	K	A	R	Q	L	.	.	A	W	K	T	T	M	L	A	R	S	G	T	V	R	M	P	T	I	Y	G	V	M	T	H	E	E	H	P	G	P	D	V	L	L	L	E	R	M	R	G	V	S	V	E	A	P	A	R	T	P	.	.	.	.	E	R	W	E	Q	L	K	D	Q	I	V	E
Query Conservation													.	.																																																			.	.	.	.
Alig confidence													.	.																												.																.	.						.	.	.	.
Template Conservation																																										.																.	.
Template Sequence		X	C	D	Q	T	T	N	T	T	Q	Q	I	T	S	G	K	V	K	A	Y	A	V	T	S	L	K	R	V	P	T	L	P	D	L	P	T	X	D	E	S	.	G	Y	K	G	F	E	V	G	I	W	H	G	X	W	A	.	.	P	K	G	T	P	K	P	V	V	D	K	L	V	K	S	L	Q	A	G	L	A
Template Known Secondary structure																T	S								S	S	S			T	T	S	T	T	S		B	T	T	T	T	.	T		T	T												.	.		T	T
Template Predicted Secondary structure																																										.																.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions