 |
Job Description | P0AB03 | Confidence | 3.76% | Date | Thu Jan 5 11:14:16 GMT 2012 |
Rank | 81 | Aligned Residues | 59 |
% Identity | 25% | Template | c1ub2A_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:catalase-peroxidase; |
PDBTitle: crystal structure of catalase-peroxidase from synechococcus pcc 7942
|
Resolution | 2.40 Å |
|
 |
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | 130 | . | . | . | . | . | |
. | . | . | . | 140 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | P | D | V | L | L | L | E | R | M | R | G | V | S | V | E | A | P | A | R | T | P | E | R | W | E | Q | L | K | D | Q | I | V | E | A | . |
. |
. |
. |
. |
. |
. |
. |
L | L | A | W | H | R | Q | . |
. |
. |
. |
. |
. |
. |
D | S | R | G | C | V | G | A | . |
V | D | N | T | Q | E | N | F | W | P |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|
|
|
|
|   |
|
|
|
|
|   |   |   |   |   |
|
|
|
|
|
|   |
|
|
|   |
|
|   |   |   |   |
Template Sequence |   |
G | P | D | V | P | Q | E | D | L | I | W | Q | D | P | I | P | A | G | N | R | N | Y | . |
D | V | Q | A | V | K | D | R | I | A | A | S | G | L | S | I | S | E | L | V | S | T | A | W | D | S | A | R | T | Y | R | N | S | D | K | R | G | G | A | N | G | A | R | I | R | L | A | P | Q | K | D | W | E |
Template Known Secondary structure |   |
S | T | T |
|
| S | S |
|
| G | G | G |
|
|
|
|
|
|
|
|
| S | . |
|  |  |  |  |  |  |  |  |  |  | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| B | T | T | T | T | B |
| S | S | T | B | T | G | G | G | S | T | T | G | G | G |
| G |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
422 | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | |
. | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|