Job Description P0AB03 Confidence 3.56% Date Thu Jan 5 11:14:16 GMT 2012 Rank 87 Aligned Residues 37 % Identity 19% Template c1l6nA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:gag polyprotein; PDBTitle: structure of the n-terminal 283-residue fragment of the hiv-2 1 gag polyprotein Resolution UNK

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		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	A	E	D	L	L	W	S	Y	L	Q	R	A	P	V	A	E	S	F	I	W	R	R	W	L	Y	V	L	W	D	E	V	A	Q	L	V	N
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		T	L	Q	E	Q	I	G	W	M	T	.	H	N	P	P	I	P	V	G	E	I	Y	K	R	W	I	I	L	G	L	N	K	I	V	R	M	Y	S
Template Known Secondary structure											T	.	S	S	S																							S	S
Template Predicted Secondary structure												.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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