Return to main results Retrieve Phyre Job Id

Job DescriptionP0A7F6
Confidence18.68%DateThu Jan 5 11:05:34 GMT 2012
Rank27Aligned Residues63
% Identity22%Templatec3lqzA_
PDB info PDB header:immune systemChain: A: PDB Molecule:hla class ii histocompatibility antigen, dp alpha 1 chain; PDBTitle: crystal structure of hla-dp2
Resolution3.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   60.........70.........80.........90.........100.........110.........120.........130.........
Predicted Secondary structure 














































Query SS confidence 















































































Query Sequence  GANILNIARQDYEPQGASVTILVSEEPVDPKLIDKTEHPGPLPETVVAHLDKSHICVHTYPESHPEGGLCTFRADIEVST
Query Conservation 

 

 

 


 




  




                 
 

















     

 







 
Alig confidence 































....





















..



............



Template Conservation      
 
 
 



  
 
 
  

       ....      

 




  
 
 
 ..    ............  

Template Sequence  QPNTLICHIDKFFPPVLNVTWLCNGELVTEGV. . . . AESLFLPRTDYSFHKFHYLTFV. . PSAE. . . . . . . . . . . . DFYD
Template Known Secondary structure 

BS


TT

TT....



TTS

..

SS............

Template Predicted Secondary structure 













....





..



............
Template SS confidence 















































































   101........110.........120.........130.. .......140.........150.... .... .160..
 
   140
Predicted Secondary structure 
Query SS confidence 
Query Sequence  C
Query Conservation 
Alig confidence 
Template Conservation 
Template Sequence  C
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   163
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions