Job Description P0A7F6 Confidence 10.22% Date Thu Jan 5 11:05:34 GMT 2012 Rank 60 Aligned Residues 63 % Identity 19% Template c2yf6A_ PDB info PDB header:immune system Chain: A: PDB Molecule:major histocompatibility complex class i glycoprotein PDBTitle: complex of a b21 chicken mhc class i molecule and a 10mer2 chicken peptide Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	N	I	L	N	I	A	R	Q	D	Y	E	P	Q	G	A	S	V	T	I	L	V	S	E	E	P	V	D	P	K	L	I	D	K	T	E	H	P	G	P	L	P	E	T	V	V	A	H	L	D	K	S	H	I	C	V	H	T	Y	P	E	S	H	P	E	G	G	L	C	T	F	R	A	D	I	E	V	S	T
Query Conservation
Alig confidence																									.	.	.	.																																.	.					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.																																.	.					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	I	L	T	L	S	C	R	A	H	G	F	Y	P	R	P	I	V	V	S	W	L	K	.	.	.	.	D	G	A	V	R	G	Q	D	A	Q	S	G	G	I	V	P	N	G	D	G	T	Y	H	T	W	V	T	I	D	A	Q	.	.	P	G	D	G	.	.	.	.	.	.	.	.	.	.	.	.	D	K	Y	Q
Template Known Secondary structure		S												B	S	S									.	.	.	.	S	S		B		T	T	T										T	T	S												.	.	T	T		S	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																									.	.	.	.																																.	.					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.					.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.			.	.	.	250													.	.	.	.
		140
Predicted Secondary structure
Query SS confidence
Query Sequence		C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		255

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions