Job Description P0A7F6 Confidence 23.27% Date Thu Jan 5 11:05:34 GMT 2012
Rank 23 Aligned Residues 63
% Identity 19% Template c2q6wD_
PDB info
PDB header: immune systemChain: D: PDB Molecule: hla class ii histocompatibility antigen, dr
PDBTitle: the structure of hla-dra, drb3*0101 (dr52a) with bound2 platelet integrin peptide associated with fetal and3 neonatal alloimmune thrombocytopenia
Resolution 2.25 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
G A N I L N I A R Q D Y E P Q G A S V T I L V S E E P V D P K L I D K T E H P G P L P E T V V A H L D K S H I C V H T Y P E S H P E G G L C T F R A D I E V S T
Query Conservation  
                                                             
Alig confidence  
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Template Conservation  
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Template Sequence  
E P N V L I C F I D K F T P P V V N V T W L R .
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N G K P V T T G V S E T V F L P R E D H L F R K F H Y L P F .
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L P S T E .
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D V Y D
Template Known Secondary structure  
B B S S . . . . T T T T T T S . . T T . . . . . . . . . . . .
Template Predicted Secondary structure  
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Template SS confidence  
   
101 . . . . . . . . 110 . . . . . . . . . 120 . . .
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. 160 . .
 
   
140
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
C
Query Conservation  
Alig confidence  
Template Conservation  
Template Sequence  
C
Template Known Secondary structure  
Template Predicted Secondary structure  
Template SS confidence  
   
163
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]