Return to main results Retrieve Phyre Job Id

Job DescriptionP0A7F6
Confidence23.27%DateThu Jan 5 11:05:34 GMT 2012
Rank23Aligned Residues63
% Identity19%Templatec2q6wD_
PDB info PDB header:immune systemChain: D: PDB Molecule:hla class ii histocompatibility antigen, dr PDBTitle: the structure of hla-dra, drb3*0101 (dr52a) with bound2 platelet integrin peptide associated with fetal and3 neonatal alloimmune thrombocytopenia
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   60.........70.........80.........90.........100.........110.........120.........130.........
Predicted Secondary structure 














































Query SS confidence 















































































Query Sequence  GANILNIARQDYEPQGASVTILVSEEPVDPKLIDKTEHPGPLPETVVAHLDKSHICVHTYPESHPEGGLCTFRADIEVST
Query Conservation 

 

 

 


 




  




                 
 

















     

 







 
Alig confidence 






















....





























..




............



Template Conservation      
 
 
 



  
 
 
  ....

             
  



   
 
 
..     ............  

Template Sequence  EPNVLICFIDKFTPPVVNVTWLR. . . . NGKPVTTGVSETVFLPREDHLFRKFHYLPF. . LPSTE. . . . . . . . . . . . DVYD
Template Known Secondary structure  B
BSS

....TT
TT




TTS
..


TT............
Template Predicted Secondary structure 







....












..



............
Template SS confidence 















































































   101........110.........120... ......130.........140.........150... ..... .160..
 
   140
Predicted Secondary structure 
Query SS confidence 
Query Sequence  C
Query Conservation 
Alig confidence 
Template Conservation 
Template Sequence  C
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   163
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions