Job Description P0A7F6 Confidence 16.72% Date Thu Jan 5 11:05:34 GMT 2012 Rank 31 Aligned Residues 61 % Identity 21% Template c2p24B_ PDB info PDB header:immune system Chain: B: PDB Molecule:h-2 class ii histocompatibility antigen, a-u beta chain; PDBTitle: i-au/mbp125-135 Resolution 2.15 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	L	N	I	A	R	Q	D	Y	E	P	Q	G	A	S	V	T	I	L	V	S	E	E	P	V	D	P	K	L	I	D	K	T	E	H	P	G	P	L	P	E	T	V	V	A	H	L	D	K	S	H	I	C	V	H	T	Y	P	E	S	H	P	E	G	G	L	C	T	F	R	A	D	I	E	V	S	T	C
Query Conservation
Alig confidence																						.	.	.	.																																	.	.					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.																																	.	.					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	T	L	V	C	S	V	T	D	F	Y	P	A	K	I	K	V	R	W	F	.	.	.	.	R	N	G	Q	E	E	T	V	G	V	S	S	T	Q	L	I	R	N	G	D	W	T	F	Q	V	L	V	M	L	E	M	T	.	.	P	R	R	G	.	.	.	.	.	.	.	.	.	.	.	.	E	V	Y	T	C
Template Known Secondary structure												B	S	S								.	.	.	.		T	T					T	T										S	S	S												.	.			T	T	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.																																	.	.					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.					.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.			.	.	.	.													.	270	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions