Job Description P0A7F6 Confidence 9.49% Date Thu Jan 5 11:05:34 GMT 2012 Rank 64 Aligned Residues 63 % Identity 16% Template c1zt7C_ PDB info PDB header:immune system Chain: C: PDB Molecule:h-2 class i histocompatibility antigen, k-k PDBTitle: crystal structure of class i mhc h-2kk in complex with a2 nonapeptide Resolution 3.00 Å

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	N	I	L	N	I	A	R	Q	D	Y	E	P	Q	G	A	S	V	T	I	L	V	S	E	E	P	V	D	P	K	L	I	D	K	T	E	H	P	G	P	L	P	E	T	V	V	A	H	L	D	K	S	H	I	C	V	H	T	Y	P	E	S	H	P	E	G	G	L	C	T	F	R	A	D	I	E	V	S	T
Query Conservation
Alig confidence																																		.	.	.	.																							.	.					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.																							.	.					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	K	V	T	L	R	C	W	A	L	G	F	Y	P	A	D	I	T	L	T	W	Q	L	N	G	E	E	L	T	Q	D	M	.	.	.	.	E	L	V	E	T	R	P	A	G	D	G	T	F	Q	K	W	A	S	V	V	V	P	.	.	L	G	K	E	.	.	.	.	.	.	.	.	.	.	.	.	Q	Y	Y	T
Template Known Secondary structure		T												B	S	S									T	T					S			.	.	.	.									S	S	S												.	.	T	T	G	G	.	.	.	.	.	.	.	.	.	.	.	.	G	G
Template Predicted Secondary structure																																		.	.	.	.																							.	.					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.					.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250			.	.	.	.													.	.	.	.
		140
Predicted Secondary structure
Query SS confidence
Query Sequence		C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		259

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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