Job Description P0A7F6 Confidence 32.83% Date Thu Jan 5 11:05:34 GMT 2012 Rank 15 Aligned Residues 63 % Identity 21% Template c1d9kD_ PDB info PDB header:immune system Chain: D: PDB Molecule:mhc i-ak b chain (beta chain); PDBTitle: crystal structure of complex between d10 tcr and pmhc i-ak/ca Resolution 3.20 Å

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	N	I	L	N	I	A	R	Q	D	Y	E	P	Q	G	A	S	V	T	I	L	V	S	E	E	P	V	D	P	K	L	I	D	K	T	E	H	P	G	P	L	P	E	T	V	V	A	H	L	D	K	S	H	I	C	V	H	T	Y	P	E	S	H	P	E	G	G	L	C	T	F	R	A	D	I	E	V	S	T
Query Conservation
Alig confidence																																		.	.	.	.																							.	.					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.																							.	.					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	H	N	T	L	V	C	S	V	T	D	F	Y	P	A	K	I	K	V	R	W	F	R	N	G	Q	E	E	T	V	G	V	.	.	.	.	S	S	T	Q	L	I	R	N	G	D	W	T	F	Q	V	L	V	M	L	E	M	T	.	.	P	R	R	G	.	.	.	.	.	.	.	.	.	.	.	.	E	V	Y	T
Template Known Secondary structure		S												B	S	S									T	T					S	S	B	.	.	.	.									S	S	S												.	.			T	T	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.	.	.	.																							.	.					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.					.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.													.	170	.	.
		140
Predicted Secondary structure
Query SS confidence
Query Sequence		C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		173

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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