Job Description P27126 Confidence 85.09% Date Thu Jan 5 11:43:13 GMT 2012 Rank 6 Aligned Residues 154 % Identity 14% Template c2xmpB_ PDB info PDB header:sugar binding protein Chain: B: PDB Molecule:trehalose-synthase tret; PDBTitle: crystal structure of trehalose synthase tret mutant e326a2 from p.horishiki in complex with udp Resolution 2.50 Å

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		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.																				.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	N	N	S	Q	P	I	C	F	F	L	G	R	D	K	.	G	R	L	Q	I	I	N	E	L	A	E	R	L	T	T	L	G	C	K	L	D	F	N	V	V	K	D	K	T	S	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	K	Y	L	I	E	K	Q	I	S	Y	E
Query Conservation																	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	P	E	K	P	I	I	T	Q	V	S	R	F	D	P	W	K	G	I	F	D	V	I	E	I	Y	R	K	V	K	E	K	I	P	G	V	Q	L	L	L	V	G	V	M	A	H	D	D	P	E	G	W	I	Y	F	E	K	T	L	R	K	I	G	E	D	Y	D	V	K	V	L	T	N	L	I	G	V	H	A	R
Template Known Secondary structure			T	T	S										S	T	T	S																	T	T											T	T																T	T		T	T						G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.			.	.	.	.	.	.	.	280	.	.	.			.	.	.
Predicted Secondary structure																																																																.	.												.	.
Query SS confidence																																																																.	.												.	.
Query Sequence		E	N	I	R	R	T	L	N	A	N	I	I	V	D	I	T	K	E	N	Q	S	G	W	T	L	R	I	L	E	A	L	F	F	N	K	K	L	I	T	N	N	I	N	V	F	G	S	E	I	Y	S	E	S	R	F	F	I	I	G	H	D	D	.	.	W	D	K	L	E	Y	F	I	N	S	S	.	.	V	K	P
Query Conservation																																																																.	.												.	.
Alig confidence															.	.																																																.	.												.	.
Template Conservation															.	.
Template Sequence		E	V	N	A	F	Q	R	A	S	D	V	I	L	.	.	Q	M	S	I	R	A	G	F	G	L	T	V	T	E	A	M	W	K	G	K	P	V	I	G	R	A	V	G	G	I	K	F	Q	I	V	D	G	E	T	G	F	L	V	R	D	A	N	E	A	V	E	V	V	L	Y	L	L	K	H	P	E	V	S	K	E
Template Known Secondary structure									T		S				.	.				S	S		S	S										T	T							S										B	T	T	T					S	S
Template Predicted Secondary structure															.	.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320			.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		287	.	.	290					.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.
Query SS confidence						.	.	.	.
Query Sequence		M	D	Y	D	.	.	.	.	S	L	Y	K	F	S	P	D	K	M	M	S	T	I	V	S
Query Conservation						.	.	.	.
Alig confidence						.	.	.	.
Template Conservation
Template Sequence		M	G	A	K	A	K	E	R	V	R	K	N	F	I	I	T	K	H	M	E	R	Y	L	D
Template Known Secondary structure														T	B
Template Predicted Secondary structure
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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