Job Description P27126 Confidence 26.95% Date Thu Jan 5 11:43:13 GMT 2012 Rank 16 Aligned Residues 140 % Identity 14% Template c2xcuC_ PDB info PDB header:transferase Chain: C: PDB Molecule:3-deoxy-d-manno-2-octulosonic acid transferase; PDBTitle: membrane-embedded monofunctional glycosyltransferase waaa of aquifex2 aeolicus, comlex with cmp Resolution 2.42 Å

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		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	N	Y	F	D	I	I	Y	D	F	E	H	R	F	I	G	N	E	K	I	K	A	I	E	Q	F	F	P	I	G	M	D	E	I	R	N	Y	S	L	S	D	K	N	N	S	Q	P	I	C	F	F	L	G	R	D	K	G	R	L	Q	I	I	N	E	L	A	E	R	L	T	T	L	G	C	K	L	D	F	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	K	K	F	D	L	I	I	M	R	T	Q	E	D	V	E	K	F	K	T	F	G	A	K	R	V	F	S	C	G	N	L	K	F	I	C	Q	K	G	K	G	I	K	L	K	G	E	F	I	V	A	G	S	I	H	T	G	E	V	E	I	I	L	K	A	F	K	E	I	K	K	T	Y	S	S	L	K	L	I
Template Known Secondary structure			G	G	G		S					S	S									T	T	T		S	S							G	G	G											S	S										G	G	G													T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.																			.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query Sequence		V	V	K	D	K	T	S	S	T	T	S	K	Y	L	I	E	K	Q	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Y	E	E	N	I	R	R	T	L	N	A	N	.	I	I	V	D	I	T	K	E	N	Q	S	G	W	T	L	R	I	L	E	A	L	F	F	N	K	K	L	I	T
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.															.	.
Template Conservation																																																																			.	.
Template Sequence		L	V	P	R	H	I	E	N	A	K	I	F	E	K	K	A	R	D	F	G	F	K	T	S	F	F	E	N	L	E	G	D	V	I	L	V	D	R	F	G	I	L	K	E	L	Y	P	V	G	K	I	A	I	V	G	G	T	F	V	N	I	G	G	H	N	.	.	L	L	E	P	T	C	W	G	I	P	V	I	Y
Template Known Secondary structure					S	S	G	G	G											T	T						T	T				S	S							T	T						G	G	G								S	S	S	S	T	T					.	.							T	T
Template Predicted Secondary structure																																																																			.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.	.	.	.	.
		250
Predicted Secondary structure
Query SS confidence
Query Sequence		N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		287

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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