Job Description P27126 Confidence 63.15% Date Thu Jan 5 11:43:13 GMT 2012 Rank 9 Aligned Residues 152 % Identity 16% Template c1uquB_ PDB info PDB header:synthase Chain: B: PDB Molecule:alpha, alpha-trehalose-phosphate synthase; PDBTitle: trehalose-6-phosphate from e. coli bound with udp-glucose. Resolution 2.0 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		151	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.				.	.	.	.	.	.	.	.	190	.	.	.																												.	.	.	.	.
Predicted Secondary structure																.	.																		.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.																		.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	N	N	S	Q	P	I	C	F	F	L	G	R	D	.	.	K	G	R	L	Q	I	I	N	E	L	A	E	R	L	T	T	L	.	.	.	G	C	K	L	D	F	N	V	V	K	D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	S	T	T
Query Conservation																.	.																		.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.																		.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	N	V	Q	N	I	F	S	V	E	R	L	D	Y	S	K	G	L	P	E	R	F	L	A	Y	E	A	L	L	E	K	Y	P	Q	H	H	G	K	I	R	Y	T	Q	I	A	P	T	S	R	G	D	V	Q	A	Y	Q	D	I	R	H	Q	L	E	N	E	A	G	R	I	N	G	K	Y	G	Q	L	G	W	T
Template Known Secondary structure		S	T	T												G	G	G																	G	G	G	T	T	T												T	T	S	S		T	T																			B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.						.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.
Query Sequence		S	K	Y	L	I	E	K	Q	I	S	Y	E	E	N	I	R	R	T	L	N	A	N	I	I	V	D	I	T	K	E	N	Q	S	G	W	T	L	R	I	L	E	A	L	F	F	N	K	K	.	.	.	.	.	L	I	T	N	N	I	N	V	F	G	S	E	I	Y	S	E	S	R	F	F	I	I	G	H	D	D	W
Query Conservation																																																		.	.	.	.	.
Alig confidence																											.	.																						.	.	.	.	.														.	.	.
Template Conservation																											.	.																																								.	.	.
Template Sequence		P	L	Y	Y	L	N	Q	H	F	D	R	K	L	L	M	K	I	F	R	Y	S	D	V	G	L	.	.	V	T	P	L	R	D	G	M	N	L	V	A	K	E	Y	V	A	A	Q	D	P	A	N	P	G	V	L	V	L	S	Q	F	A	G	A	A	N	E	L	.	.	.	T	S	A	L	I	V	N	P	Y	D	R
Template Known Secondary structure		S						S															S				.	.				S	S	B	S												S		T	T	S								T	T	B	G	G	G	G	T		.	.	.	T	T	S					T	T
Template Predicted Secondary structure																											.	.																																								.	.	.
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.			.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.				.	.	.	.	.	400	.	.	.	.	.
		274	.	.	.	.					.	280	.	.	.	.	.	.	.	.	.							290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.												.	.	.	.	.	.
Query SS confidence							.	.	.	.												.	.	.	.	.	.
Query Sequence		D	K	L	E	Y	.	.	.	.	F	I	N	S	S	V	K	P	M	D	Y	.	.	.	.	.	.	D	S	L	Y	K	F	S	P	D	K	M	M	S	T	I	V	S	D
Query Conservation							.	.	.	.												.	.	.	.	.	.
Alig confidence							.	.	.	.												.	.	.	.	.	.
Template Conservation
Template Sequence		D	E	V	A	A	A	L	D	R	A	L	T	M	S	L	A	E	R	I	S	R	H	A	E	M	L	D	V	I	V	K	N	D	I	N	H	W	Q	E	C	F	I	S	D
Template Known Secondary structure													T																				T
Template Predicted Secondary structure
Template SS confidence
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions