Return to main results Retrieve Phyre Job Id

Job DescriptionP75982
Confidence1.89%DateThu Jan 5 12:16:55 GMT 2012
Rank82Aligned Residues37
% Identity19%Templatec3sztB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:quorum-sensing control repressor; PDBTitle: quorum sensing control repressor, qscr, bound to n-3-oxo-dodecanoyl-l-2 homoserine lactone
Resolution2.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   64.....70.........80.........90.........100.........110
Predicted Secondary structure 



















Query SS confidence 














































Query Sequence  RLCGLPDECIPAGTQTLRQRQQRLDAKVNLAGGINEDFYLAQLAALG
Query Conservation     



 
      
   

  
  

   

 
  
   

  

Alig confidence 




.......















...















Template Conservation    
 
.......
  

  
   
  

...

 

 


  
   
Template Sequence  LILSI. . . . . . . DQRTVKFHIVNAMRKL. . . NSSNKAEATMKAYAIG
Template Known Secondary structure  T
.......
T...T
SST
Template Predicted Secondary structure 

.......
...





Template SS confidence 














































   198.200.. .......210........ .220.........230....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions