 |
Job Description | P75982 | Confidence | 2.58% | Date | Thu Jan 5 12:16:55 GMT 2012 |
Rank | 47 | Aligned Residues | 33 |
% Identity | 33% | Template | c2ic6B_ |
PDB info |
PDB header:viral protein | Chain: B: PDB Molecule:nucleocapsid protein; |
PDBTitle: the coiled-coil domain (residues 1-75) structure of the sin2 nombre virus nucleocapsid protein
|
Resolution | 1.15 Å |
|
  |   |
54 | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
. | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | T | T | E | L | I | N | R | W | E | R | L | C | G | L | . |
P | D | E | C | I | P | A | G | T | Q | T | L | R | Q | R | Q | Q | R | L | D | A |
Query Conservation |   |
|
|
|   |   |
|   |   |
|
|   |   |   |
|
| . |
|
|   |
|   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|
|   |
|   | . | . | . |
|
|
|   |
|   |   |   |
|
|
|
Template Sequence |   |
T | T | R | Q | K | L | K | D | A | E | R | A | V | E | L | D | P | D | D | V | N | K | S | . |
. |
. |
T | L | Q | S | R | R | A | A | V | S | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | |
|
|
. | . | . | . | . | . | . | 50 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|