Job Description P75982 Confidence 1.80% Date Thu Jan 5 12:16:55 GMT 2012 Rank 96 Aligned Residues 37 % Identity 8% Template c1h0mD_ PDB info PDB header:transcription/dna Chain: D: PDB Molecule:transcriptional activator protein trar; PDBTitle: three-dimensional structure of the quorum sensing protein2 trar bound to its autoinducer and to its target dna Resolution 3.0 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	C	G	L	P	D	E	C	I	P	A	G	T	Q	T	L	R	Q	R	Q	Q	R	L	D	A	K	V	N	L	A	G	G	I	N	E	D	F	Y	L	A	Q	L	A	A	L	G
Query Conservation
Alig confidence							.	.	.	.	.	.	.																				.	.	.
Template Conservation							.	.	.	.	.	.	.																				.	.	.
Template Sequence		D	V	E	G	V	.	.	.	.	.	.	.	K	Y	N	S	V	R	V	K	L	R	E	A	X	K	R	F	D	V	R	.	.	.	S	K	A	H	L	T	A	L	A	I	R	R	K
Template Known Secondary structure				T	T		.	.	.	.	.	.	.																	T		S	.	.	.	S											T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.																				.	.	.
Template SS confidence
		196	.	.	.	200								.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.				220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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