Return to main results Retrieve Phyre Job Id

Job DescriptionP31453
Confidence56.55%DateThu Jan 5 11:47:45 GMT 2012
Rank365Aligned Residues35
% Identity17%Templated2iu5a1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Tetracyclin repressor-like, N-terminal domain
Resolution1.6

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40..
Predicted Secondary structure 














Query SS confidence 






































Query Sequence  KSIAERLRIRLNSADFTLNSLLPGEKKLAEEFAVSRMTI
Query Conservation   

   
   
  
    
 




 


   



 

Alig confidence 
















...

.















Template Conservation    
  

  
    
  ...  .
   

  



    
Template Sequence  KIIAKAFKDLMQSNAYH. . . QI. SVSDIMQTAKIRRQTF
Template Known Secondary structure  S
GG...G
.
TS
GGGG
Template Predicted Secondary structure 



...

.
Template SS confidence 






































   910.........20..... .. ..30.........40...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions