Return to main results Retrieve Phyre Job Id

Job DescriptionP31453
Confidence90.84%DateThu Jan 5 11:47:45 GMT 2012
Rank216Aligned Residues52
% Identity19%Templated1lvaa3
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain C-terminal fragment of elongation factor SelB
Resolution2.12

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........
Predicted Secondary structure 


















Query SS confidence 



















































Query Sequence  ERLRIRLNSADFTLNSLLPGEKKLAEEFAVSRMTIRKAIDLLVAWGLVVRRH
Query Conservation    
   
  
    
 




 


   



 


 

  
   


    
Alig confidence 



















































Template Conservation    
   
   
  


 

  


   
         

  
   
 



 
Template Sequence  KKLLKDLEDKYRVSRWQPPSFKEVAGSFNLDPSELEELLHYLVREGVLVKIN
Template Known Secondary structure  TTS

BTT

TTSSS
Template Predicted Secondary structure 













Template SS confidence 



















































   516...520.........530.........540.........550.........560.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions