Job Description P31453 Confidence 97.29% Date Thu Jan 5 11:47:45 GMT 2012 Rank 45 Aligned Residues 60 % Identity 15% Template d1i5za1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain CAP C-terminal domain-like Resolution 1.90

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.				.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																.												.	.	.
Query SS confidence																.												.	.	.
Query Sequence		I	Y	K	S	I	A	E	R	L	R	I	R	L	N	.	S	A	D	F	T	L	N	S	L	L	P	.	.	.	G	E	K	K	L	A	E	E	F	A	V	S	R	M	T	I	R	K	A	I	D	L	L	V	A	W	G	L	V	V	R	R	H	G	S
Query Conservation																.												.	.	.
Alig confidence																.												.	.	.
Template Conservation
Template Sequence		V	T	G	R	I	A	Q	T	L	L	N	L	A	K	Q	P	D	A	M	T	H	P	D	G	M	Q	I	K	I	T	R	Q	E	I	G	Q	I	V	G	C	S	R	E	T	V	G	R	I	L	K	M	L	E	D	Q	N	L	I	S	A	H	G	K	T
Template Known Secondary structure													G	G	G	S	T	T					S	S	S															T																T	T	S					T	T
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions